Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Colca2F8VPY8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Colca2F8VPY8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.58□□□□□ -0.56
Colca2F8VPY8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.58□□□□□ -0.56
Colca2F8VPY8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.58□□□□□ -0.56
Colca2F8VPY8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm7150-201ENSMUST00000122032 981 ntBASIC11.58□□□□□ -0.56
Colca2F8VPY8 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm4862-201ENSMUST00000170405 438 ntBASIC11.58□□□□□ -0.56
Colca2F8VPY8 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm18059-201ENSMUST00000208073 580 ntBASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm8342-201ENSMUST00000209839 757 ntBASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.58□□□□□ -0.56
Colca2F8VPY8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.57□□□□□ -0.56
Colca2F8VPY8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm23272-201ENSMUST00000104053 129 ntBASIC11.57□□□□□ -0.56
Colca2F8VPY8 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm9136-201ENSMUST00000193368 454 ntBASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.57□□□□□ -0.56
Colca2F8VPY8 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Gm5805-201ENSMUST00000072779 456 ntBASIC11.57□□□□□ -0.56
Colca2F8VPY8 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Colca2F8VPY8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms