Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Gm10774-201ENSMUST00000188689 204 ntBASIC14.76□□□□□ -0.05
Ube4aE9Q735 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.76□□□□□ -0.05
Ube4aE9Q735 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ube4aE9Q735 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.76□□□□□ -0.05
Ube4aE9Q735 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.75□□□□□ -0.05
Ube4aE9Q735 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.75□□□□□ -0.05
Ube4aE9Q735 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm11663-201ENSMUST00000117888 290 ntBASIC14.75□□□□□ -0.05
Ube4aE9Q735 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.75□□□□□ -0.05
Ube4aE9Q735 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm13461-201ENSMUST00000120980 662 ntBASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm28686-201ENSMUST00000187404 609 ntBASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm4034-201ENSMUST00000187674 480 ntBASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.75□□□□□ -0.05
Ube4aE9Q735 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4aE9Q735 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.74□□□□□ -0.05
Ube4aE9Q735 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.74□□□□□ -0.05
Ube4aE9Q735 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Gm15004-201ENSMUST00000119192 630 ntBASIC14.74□□□□□ -0.05
Ube4aE9Q735 Gm11660-201ENSMUST00000120955 412 ntBASIC14.74□□□□□ -0.05
Ube4aE9Q735 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Mir6546-201ENSMUST00000184460 62 ntBASIC14.74□□□□□ -0.05
Ube4aE9Q735 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.74□□□□□ -0.05
Ube4aE9Q735 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4aE9Q735 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.74□□□□□ -0.05
Ube4aE9Q735 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.73□□□□□ -0.05
Ube4aE9Q735 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4aE9Q735 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms