Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.07□□□□□ -0.48
Chd3B1AR17 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.07□□□□□ -0.48
Chd3B1AR17 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Chd3B1AR17 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chd3B1AR17 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm12857-201ENSMUST00000117678 592 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm9555-201ENSMUST00000200908 583 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Chd3B1AR17 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.06□□□□□ -0.48
Chd3B1AR17 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Chd3B1AR17 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm27552-201ENSMUST00000183351 62 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm27844-201ENSMUST00000183613 62 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.06□□□□□ -0.48
Chd3B1AR17 Nsd1-205ENSMUST00000224693 852 ntBASIC12.06□□□□□ -0.48
Chd3B1AR17 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chd3B1AR17 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Chd3B1AR17 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.05□□□□□ -0.48
Chd3B1AR17 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Chd3B1AR17 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Chd3B1AR17 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.05□□□□□ -0.48
Chd3B1AR17 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chd3B1AR17 Gm22334-201ENSMUST00000158070 133 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms