Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.85□□□□□ -0.35
Scn1aA2APX8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Gm15711-201ENSMUST00000118889 535 ntBASIC12.85□□□□□ -0.35
Scn1aA2APX8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Gm19208-201ENSMUST00000213861 912 ntBASIC12.85□□□□□ -0.35
Scn1aA2APX8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.85□□□□□ -0.35
Scn1aA2APX8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.85□□□□□ -0.35
Scn1aA2APX8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scn1aA2APX8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Gm23699-201ENSMUST00000158835 135 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 B9d1os-201ENSMUST00000137010 674 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Gm10051-201ENSMUST00000145209 414 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Gm16570-201ENSMUST00000161951 436 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Gm18893-201ENSMUST00000198416 943 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.84□□□□□ -0.35
Scn1aA2APX8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.84□□□□□ -0.35
Scn1aA2APX8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scn1aA2APX8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.83□□□□□ -0.35
Scn1aA2APX8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Scn1aA2APX8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scn1aA2APX8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm11509-201ENSMUST00000117358 325 ntBASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm15515-201ENSMUST00000117827 822 ntBASIC12.83□□□□□ -0.36
Scn1aA2APX8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm3332-201ENSMUST00000189337 928 ntBASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Gm9136-201ENSMUST00000193368 454 ntBASIC12.83□□□□□ -0.36
Scn1aA2APX8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scn1aA2APX8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms