Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm44159-201ENSMUST00000204065 442 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm43807-201ENSMUST00000200678 1781 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm17147-201ENSMUST00000164176 432 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm6317-201ENSMUST00000183159 1000 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm7210-201ENSMUST00000209309 1067 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm18035-201ENSMUST00000211962 589 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm42970-201ENSMUST00000196407 1352 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Mir6972-201ENSMUST00000184774 64 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm43811-201ENSMUST00000202862 695 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 AC129217.1-201ENSMUST00000225181 642 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 AC238940.1-201ENSMUST00000225106 1858 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 CT010478.1-201ENSMUST00000220747 2787 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm11475-201ENSMUST00000118482 476 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm27953-201ENSMUST00000185171 143 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm6108-201ENSMUST00000208365 367 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm37600-201ENSMUST00000193764 3292 ntBASIC6.31□□□□□ -1.4
Ubr4A2AN08 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ubr4A2AN08 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm11511-201ENSMUST00000118146 540 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm5863-201ENSMUST00000121760 1008 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm8601-201ENSMUST00000182096 909 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm28686-201ENSMUST00000187404 609 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm42908-201ENSMUST00000197508 870 ntBASIC6.3□□□□□ -1.4
Ubr4A2AN08 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ubr4A2AN08 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms