Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm13223-201ENSMUST00000118609 747 ntBASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Gm43575-201ENSMUST00000196420 516 ntBASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav3n-3A0A0G2JEM0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms