Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5-4A0A075B652 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm9630-201ENSMUST00000178304 885 ntBASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm32025-201ENSMUST00000217960 307 ntBASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav5-4A0A075B652 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.35□□□□□ -0.75
Trav5-4A0A075B652 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms