Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav8-1A0A075B641 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm10829-201ENSMUST00000202084 2988 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm37015-201ENSMUST00000192763 1521 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm7820-201ENSMUST00000121012 1052 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm27622-201ENSMUST00000183779 60 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm27772-201ENSMUST00000184900 187 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm28630-201ENSMUST00000187806 498 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm42498-201ENSMUST00000199981 1372 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm5648-201ENSMUST00000122244 1587 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Gm43522-201ENSMUST00000196697 1922 ntBASIC8.82□□□□□ -1
Trav8-1A0A075B641 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav8-1A0A075B641 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Gm14730-201ENSMUST00000122378 1045 ntBASIC8.81□□□□□ -1
Trav8-1A0A075B641 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Gm7498-201ENSMUST00000203282 1084 ntBASIC8.81□□□□□ -1
Trav8-1A0A075B641 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav8-1A0A075B641 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms