Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.34□□□□□ -0.43
H2afb2S4R1M3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.34□□□□□ -0.43
H2afb2S4R1M3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H2afb2S4R1M3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H2afb2S4R1M3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
H2afb2S4R1M3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.33□□□□□ -0.43
H2afb2S4R1M3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
H2afb2S4R1M3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.33□□□□□ -0.43
H2afb2S4R1M3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm12957-201ENSMUST00000117835 377 ntBASIC12.33□□□□□ -0.44
H2afb2S4R1M3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm4034-201ENSMUST00000187674 480 ntBASIC12.33□□□□□ -0.44
H2afb2S4R1M3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
H2afb2S4R1M3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H2afb2S4R1M3 Gm8062-201ENSMUST00000139696 444 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms