Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Gm13316-201ENSMUST00000140537 691 ntBASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Gm4034-201ENSMUST00000187674 480 ntBASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cldn9Q9Z0S7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm23931-201ENSMUST00000103842 109 ntBASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm14999-201ENSMUST00000121039 624 ntBASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Cldn9Q9Z0S7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Gm5187-201ENSMUST00000117317 991 ntBASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cldn9Q9Z0S7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms