Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm11511-201ENSMUST00000118146 540 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm27552-201ENSMUST00000183351 62 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm27844-201ENSMUST00000183613 62 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Mir7677-201ENSMUST00000184226 67 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 AU022133-201ENSMUST00000200601 873 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm5455-201ENSMUST00000058710 715 ntBASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smarcb1Q9Z0H3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm23200-201ENSMUST00000104379 132 ntBASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm15711-201ENSMUST00000118889 535 ntBASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm12380-201ENSMUST00000119012 544 ntBASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm12566-201ENSMUST00000121479 359 ntBASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm18734-201ENSMUST00000172937 808 ntBASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm43378-201ENSMUST00000199336 582 ntBASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm17827-201ENSMUST00000211825 742 ntBASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Gm270-201ENSMUST00000223010 976 ntBASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smarcb1Q9Z0H3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smarcb1Q9Z0H3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms