Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm18893-201ENSMUST00000198416 943 ntBASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn8aQ9WTU3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scn8aQ9WTU3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.33□□□□□ -0.43
Scn8aQ9WTU3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.33□□□□□ -0.43
Scn8aQ9WTU3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Gm3332-201ENSMUST00000189337 928 ntBASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn8aQ9WTU3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm9192-201ENSMUST00000183221 985 ntBASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Gm12266-201ENSMUST00000120311 962 ntBASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn8aQ9WTU3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms