Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Gm25700-201ENSMUST00000177693 110 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Rprl1-202ENSMUST00000198476 238 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Gm44882-201ENSMUST00000205702 802 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Gm19187-201ENSMUST00000206781 892 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf3Q9QXK7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Cpsf3Q9QXK7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm9230-201ENSMUST00000188228 532 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm44124-201ENSMUST00000204159 472 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm44651-201ENSMUST00000207343 372 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf3Q9QXK7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms