Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Gm14542-201ENSMUST00000118460 1248 ntBASIC11.3□□□□□ -0.6
Prg4Q9JM99 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC11.3□□□□□ -0.6
Prg4Q9JM99 Gm40332-201ENSMUST00000199847 938 ntBASIC11.3□□□□□ -0.6
Prg4Q9JM99 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.3□□□□□ -0.6
Prg4Q9JM99 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Gm26226-201ENSMUST00000082509 116 ntBASIC11.3□□□□□ -0.6
Prg4Q9JM99 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prg4Q9JM99 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.3□□□□□ -0.6
Prg4Q9JM99 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.3□□□□□ -0.6
Prg4Q9JM99 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm11989-201ENSMUST00000117240 672 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm11362-201ENSMUST00000118838 850 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm13333-201ENSMUST00000119424 781 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm23757-201ENSMUST00000158353 100 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm25700-201ENSMUST00000177693 110 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm29199-201ENSMUST00000187766 775 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm19080-201ENSMUST00000196082 550 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm45186-201ENSMUST00000206874 478 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.29□□□□□ -0.6
Prg4Q9JM99 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.29□□□□□ -0.6
Prg4Q9JM99 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.28□□□□□ -0.6
Prg4Q9JM99 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Prg4Q9JM99 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms