Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubb3Q9ERD7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubb3Q9ERD7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Gm15370-201ENSMUST00000117158 253 ntBASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Mospd4-201ENSMUST00000180618 576 ntBASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Gm38158-201ENSMUST00000194617 339 ntBASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Tubb3Q9ERD7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Gm4986-201ENSMUST00000119731 549 ntBASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.26□□□□□ -0.45
Tubb3Q9ERD7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms