Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm12948-201ENSMUST00000119406 682 ntBASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-4Q9EQM3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Gm12990-201ENSMUST00000120372 468 ntBASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Gm45594-201ENSMUST00000211717 241 ntBASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Mt1-202ENSMUST00000211807 1085 ntBASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-4Q9EQM3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-4Q9EQM3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms