Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm13492-201ENSMUST00000119772 665 ntBASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm16570-201ENSMUST00000161951 436 ntBASIC11.5□□□□□ -0.57
Cdc40Q9DC48 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm2383-201ENSMUST00000181461 807 ntBASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm18827-201ENSMUST00000188341 790 ntBASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm31256-201ENSMUST00000194705 506 ntBASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdc40Q9DC48 Cog3-203ENSMUST00000227473 4197 ntBASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gm22323-201ENSMUST00000103832 109 ntBASIC11.49□□□□□ -0.57
Cdc40Q9DC48 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gm16296-201ENSMUST00000159905 325 ntBASIC11.49□□□□□ -0.57
Cdc40Q9DC48 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gm26035-201ENSMUST00000083065 308 ntBASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.49□□□□□ -0.57
Cdc40Q9DC48 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdc40Q9DC48 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm2546-201ENSMUST00000182630 991 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms