Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chmp4cQ9D7F7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Gm4984-201ENSMUST00000115987 360 ntBASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Gm14921-201ENSMUST00000118643 908 ntBASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Gm44124-201ENSMUST00000204159 472 ntBASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chmp4cQ9D7F7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Gm6266-201ENSMUST00000203844 806 ntBASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chmp4cQ9D7F7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Gm9022-201ENSMUST00000182482 992 ntBASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp4cQ9D7F7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms