Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim42Q9D2H5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Gm14350-201ENSMUST00000116642 640 ntBASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Gm13223-201ENSMUST00000118609 747 ntBASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Gm5354-201ENSMUST00000182417 973 ntBASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Gm6546-201ENSMUST00000192096 766 ntBASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim42Q9D2H5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.4□□□□□ -0.43
Trim42Q9D2H5 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim42Q9D2H5 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Gm14716-201ENSMUST00000120138 718 ntBASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim42Q9D2H5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim42Q9D2H5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.38□□□□□ -0.43
Trim42Q9D2H5 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.38□□□□□ -0.43
Trim42Q9D2H5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms