Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm12490-201ENSMUST00000120255 560 ntBASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm4034-201ENSMUST00000187674 480 ntBASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Snf8Q9CZ28 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Gm13492-201ENSMUST00000119772 665 ntBASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Gm24196-201ENSMUST00000179161 110 ntBASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Gm10012-201ENSMUST00000078252 192 ntBASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Snf8Q9CZ28 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Snf8Q9CZ28 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.69□□□□□ -0.38
Snf8Q9CZ28 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.69□□□□□ -0.38
Snf8Q9CZ28 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms