Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim11Q99PQ2 Pck2-205ENSMUST00000226352 2784 ntBASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Gm13829-201ENSMUST00000119600 138 ntBASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Gm27023-201ENSMUST00000182372 285 ntBASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Gm25007-201ENSMUST00000083808 133 ntBASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim11Q99PQ2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm5745-201ENSMUST00000183748 313 ntBASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm4034-201ENSMUST00000187674 480 ntBASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm18187-201ENSMUST00000196476 984 ntBASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm39404-201ENSMUST00000216350 313 ntBASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim11Q99PQ2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim11Q99PQ2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms