Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.37■□□□□ 0.21
Rtn4Q99P72 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gm14840-201ENSMUST00000122135 594 ntBASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gm22552-201ENSMUST00000157796 337 ntBASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gm7029-201ENSMUST00000173226 450 ntBASIC16.37■□□□□ 0.21
Rtn4Q99P72 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rtn4Q99P72 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.37■□□□□ 0.21
Rtn4Q99P72 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4Q99P72 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm14723-201ENSMUST00000118686 215 ntBASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm2541-201ENSMUST00000161209 711 ntBASIC16.36■□□□□ 0.21
Rtn4Q99P72 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm4540-201ENSMUST00000170669 429 ntBASIC16.36■□□□□ 0.21
Rtn4Q99P72 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm27039-201ENSMUST00000182438 962 ntBASIC16.36■□□□□ 0.21
Rtn4Q99P72 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm37724-201ENSMUST00000195240 1221 ntBASIC16.36■□□□□ 0.21
Rtn4Q99P72 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm44069-201ENSMUST00000204898 506 ntBASIC16.36■□□□□ 0.21
Rtn4Q99P72 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.36■□□□□ 0.21
Rtn4Q99P72 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.36■□□□□ 0.21
Rtn4Q99P72 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4Q99P72 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rtn4Q99P72 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Gm25927-201ENSMUST00000175058 117 ntBASIC16.35■□□□□ 0.21
Rtn4Q99P72 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Gm43822-201ENSMUST00000200285 476 ntBASIC16.35■□□□□ 0.21
Rtn4Q99P72 Gm43596-201ENSMUST00000202818 884 ntBASIC16.35■□□□□ 0.21
Rtn4Q99P72 Gm10608-202ENSMUST00000213924 676 ntBASIC16.35■□□□□ 0.21
Rtn4Q99P72 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rtn4Q99P72 Gm45930-201ENSMUST00000221330 292 ntBASIC16.35■□□□□ 0.21
Rtn4Q99P72 AC160962.2-201ENSMUST00000224761 632 ntBASIC16.35■□□□□ 0.21
Rtn4Q99P72 AC123738.1-201ENSMUST00000224796 773 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms