Protein–RNA interactions for Protein: Q99MV7

Rnf17, RING finger protein 17, mousemouse

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf17Q99MV7 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Gm44913-201ENSMUST00000208060 2990 ntBASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Gm8436-201ENSMUST00000210152 1080 ntBASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Gm5749-201ENSMUST00000210673 1090 ntBASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Gm21759-201ENSMUST00000178345 1828 ntBASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf17Q99MV7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf17Q99MV7 Gm45199-201ENSMUST00000207640 1507 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm15620-201ENSMUST00000122949 270 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm22379-201ENSMUST00000157480 131 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm30671-201ENSMUST00000214898 318 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 AC134537.1-201ENSMUST00000219205 265 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm24809-201ENSMUST00000175318 271 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Gm39288-201ENSMUST00000210554 446 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf17Q99MV7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC17.76■□□□□ 0.43
Rnf17Q99MV7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Gm24954-201ENSMUST00000178831 110 ntBASIC17.75■□□□□ 0.43
Rnf17Q99MV7 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Gm5599-201ENSMUST00000209602 788 ntBASIC17.75■□□□□ 0.43
Rnf17Q99MV7 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf17Q99MV7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms