Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Gm14644-201ENSMUST00000116671 647 ntBASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Pck2-205ENSMUST00000226352 2784 ntBASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb18Q91Y02 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm24514-201ENSMUST00000174961 285 ntBASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm5523-201ENSMUST00000180415 997 ntBASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm9230-201ENSMUST00000188228 532 ntBASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm44100-201ENSMUST00000204329 436 ntBASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb18Q91Y02 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Gm13611-201ENSMUST00000118269 318 ntBASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Gm15703-201ENSMUST00000120250 880 ntBASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb18Q91Y02 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms