Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb5Q91XZ5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb5Q91XZ5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Gm11511-201ENSMUST00000118146 540 ntBASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb5Q91XZ5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Gm24891-201ENSMUST00000104391 136 ntBASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Gm23912-201ENSMUST00000104687 87 ntBASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Gm15131-201ENSMUST00000119124 595 ntBASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Gm8343-201ENSMUST00000182705 994 ntBASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb5Q91XZ5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Gm26286-201ENSMUST00000104166 134 ntBASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb5Q91XZ5 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms