Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm45925-201ENSMUST00000218882 744 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.21□□□□□ -0.13
Ddx41Q91VN6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gm38317-201ENSMUST00000195564 343 ntBASIC14.21□□□□□ -0.13
Ddx41Q91VN6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.21□□□□□ -0.13
Ddx41Q91VN6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ddx41Q91VN6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.21□□□□□ -0.13
Ddx41Q91VN6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ddx41Q91VN6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm25043-201ENSMUST00000158604 212 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm45186-201ENSMUST00000206874 478 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm44967-201ENSMUST00000207047 631 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ddx41Q91VN6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms