Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Gm37922-201ENSMUST00000195596 455 ntBASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm2231-201ENSMUST00000125661 612 ntBASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Mir6392-201ENSMUST00000184924 108 ntBASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm4034-201ENSMUST00000187674 480 ntBASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm18624-201ENSMUST00000220966 658 ntBASIC10.05□□□□□ -0.8
Nup35Q8R4R6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.05□□□□□ -0.8
Nup35Q8R4R6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nup35Q8R4R6 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm9022-201ENSMUST00000182482 992 ntBASIC10.04□□□□□ -0.8
Nup35Q8R4R6 Gm27331-201ENSMUST00000183705 60 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms