Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdt1Q8R4E9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gm12217-201ENSMUST00000118858 696 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gm15782-201ENSMUST00000121073 445 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gm15276-201ENSMUST00000145953 498 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gm13097-201ENSMUST00000210722 397 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Mir339-201ENSMUST00000083659 96 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cdt1Q8R4E9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12□□□□□ -0.49
Cdt1Q8R4E9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdt1Q8R4E9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms