Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp7Q8R1T1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp7Q8R1T1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp7Q8R1T1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Gm18041-201ENSMUST00000218210 618 ntBASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC15.76■□□□□ 0.11
Chmp7Q8R1T1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Gm8100-201ENSMUST00000182906 988 ntBASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Ginm1-202ENSMUST00000065124 300 ntBASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Gm10179-201ENSMUST00000086233 688 ntBASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Chmp7Q8R1T1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm26286-201ENSMUST00000104166 134 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm11509-201ENSMUST00000117358 325 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm12857-201ENSMUST00000117678 592 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm11511-201ENSMUST00000118146 540 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm14724-201ENSMUST00000118400 537 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 Gm44545-201ENSMUST00000208262 746 ntBASIC15.74■□□□□ 0.11
Chmp7Q8R1T1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms