Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nudcd3Q8R1N4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.33□□□□□ -0.43
Nudcd3Q8R1N4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nudcd3Q8R1N4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nudcd3Q8R1N4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nudcd3Q8R1N4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nudcd3Q8R1N4 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm14057-201ENSMUST00000120631 482 ntBASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm37922-201ENSMUST00000195596 455 ntBASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nudcd3Q8R1N4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Gm11637-201ENSMUST00000120601 592 ntBASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Gm2231-201ENSMUST00000125661 612 ntBASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Nudcd3Q8R1N4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms