Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Gm8712-201ENSMUST00000221090 701 ntBASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sf3a1Q8K4Z5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Gm37259-201ENSMUST00000193903 849 ntBASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC15.11■□□□□ 0.01
Sf3a1Q8K4Z5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm15547-201ENSMUST00000122152 333 ntBASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm7584-201ENSMUST00000175829 940 ntBASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm44124-201ENSMUST00000204159 472 ntBASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Gm37472-201ENSMUST00000192342 4052 ntBASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sf3a1Q8K4Z5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sf3a1Q8K4Z5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms