Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Ebf4Q8K4J2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Gm13616-201ENSMUST00000120600 222 ntBASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ebf4Q8K4J2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ebf4Q8K4J2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ebf4Q8K4J2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms