Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm18935-201ENSMUST00000212692 664 ntBASIC11.66□□□□□ -0.54
Clrn1Q8K445 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm7399-201ENSMUST00000032395 858 ntBASIC11.66□□□□□ -0.54
Clrn1Q8K445 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clrn1Q8K445 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm9083-201ENSMUST00000120423 819 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm18304-201ENSMUST00000189162 546 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm44124-201ENSMUST00000204159 472 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.65□□□□□ -0.54
Clrn1Q8K445 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm7046-201ENSMUST00000221351 977 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Gm24136-201ENSMUST00000083374 165 ntBASIC11.65□□□□□ -0.54
Clrn1Q8K445 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clrn1Q8K445 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Clrn1Q8K445 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Clrn1Q8K445 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Clrn1Q8K445 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Clrn1Q8K445 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.64□□□□□ -0.55
Clrn1Q8K445 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Clrn1Q8K445 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.64□□□□□ -0.55
Clrn1Q8K445 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.64□□□□□ -0.55
Clrn1Q8K445 Morn2-202ENSMUST00000227729 656 ntBASIC11.64□□□□□ -0.55
Clrn1Q8K445 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms