Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm14704-201ENSMUST00000120300 874 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm4271-201ENSMUST00000174444 973 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm23363-201ENSMUST00000175024 79 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm7561-201ENSMUST00000211203 886 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Mir339-201ENSMUST00000083659 96 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rnf170Q8CBG9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm37042-201ENSMUST00000193816 581 ntBASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm8099-201ENSMUST00000200510 742 ntBASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rnf170Q8CBG9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms