Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rft1Q8C3B8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Gm16202-201ENSMUST00000117532 544 ntBASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Mir1982-201ENSMUST00000157368 74 ntBASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Gm29127-201ENSMUST00000188304 517 ntBASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rft1Q8C3B8 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm12203-201ENSMUST00000118235 598 ntBASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm12209-201ENSMUST00000120089 596 ntBASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rft1Q8C3B8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms