Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm11424-201ENSMUST00000121929 829 ntBASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm28911-201ENSMUST00000188837 117 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm38144-201ENSMUST00000192790 465 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm38223-201ENSMUST00000194484 695 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tsen54Q8C2A2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.34□□□□□ -0.75
Tsen54Q8C2A2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms