Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cpsf4Q8BQZ5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Pck2-205ENSMUST00000226352 2784 ntBASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Gm14921-201ENSMUST00000118643 908 ntBASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Gm12502-201ENSMUST00000120197 444 ntBASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Gm13786-201ENSMUST00000122371 333 ntBASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Gm10608-202ENSMUST00000213924 676 ntBASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cpsf4Q8BQZ5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm13316-201ENSMUST00000140537 691 ntBASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm38092-201ENSMUST00000195600 653 ntBASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm42627-201ENSMUST00000197347 224 ntBASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.97□□□□□ -0.49
Cpsf4Q8BQZ5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms