Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Gm14726-201ENSMUST00000120623 896 ntBASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Gm18827-201ENSMUST00000188341 790 ntBASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rab11fip4Q8BQP8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm14921-201ENSMUST00000118643 908 ntBASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab11fip4Q8BQP8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab11fip4Q8BQP8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms