Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm26035-201ENSMUST00000083065 308 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Gm38223-201ENSMUST00000194484 695 ntBASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Gm20445-201ENSMUST00000061905 565 ntBASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smco3Q8BQM7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Gm9797-201ENSMUST00000052902 613 ntBASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smco3Q8BQM7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms