Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcal1Q8BJL0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gm23251-201ENSMUST00000103773 110 ntBASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gm7851-201ENSMUST00000117574 323 ntBASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gm15432-201ENSMUST00000121106 195 ntBASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gm5051-201ENSMUST00000204085 485 ntBASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcal1Q8BJL0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gm11511-201ENSMUST00000118146 540 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gm14724-201ENSMUST00000118400 537 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gm14760-201ENSMUST00000121831 999 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcal1Q8BJL0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms