Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm11439-201ENSMUST00000118598 409 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm45186-201ENSMUST00000206874 478 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh19Q80TF3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdh19Q80TF3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh19Q80TF3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh19Q80TF3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh19Q80TF3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm25116-201ENSMUST00000157191 122 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm26461-201ENSMUST00000175064 290 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.14□□□□□ -0.47
Pcdh19Q80TF3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms