Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.53□□□□□ -0.24
Ush1gQ80T11 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Gm24845-201ENSMUST00000158034 109 ntBASIC13.53□□□□□ -0.24
Ush1gQ80T11 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.53□□□□□ -0.24
Ush1gQ80T11 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.53□□□□□ -0.24
Ush1gQ80T11 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.53□□□□□ -0.24
Ush1gQ80T11 Gm7848-201ENSMUST00000210739 718 ntBASIC13.53□□□□□ -0.24
Ush1gQ80T11 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.53□□□□□ -0.24
Ush1gQ80T11 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ush1gQ80T11 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ush1gQ80T11 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.52□□□□□ -0.25
Ush1gQ80T11 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 AU022133-201ENSMUST00000200601 873 ntBASIC13.52□□□□□ -0.25
Ush1gQ80T11 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.52□□□□□ -0.25
Ush1gQ80T11 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.52□□□□□ -0.25
Ush1gQ80T11 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ush1gQ80T11 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms