Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chd4Q6PDQ2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chd4Q6PDQ2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm28937-201ENSMUST00000185413 695 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm29400-201ENSMUST00000187208 695 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm28662-201ENSMUST00000188446 695 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm28251-201ENSMUST00000188835 695 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm37299-201ENSMUST00000193951 826 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm37318-201ENSMUST00000194325 695 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm38017-201ENSMUST00000194768 695 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm37287-201ENSMUST00000195449 695 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm37793-201ENSMUST00000195548 695 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd4Q6PDQ2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Gm14441-201ENSMUST00000121960 540 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Gm6114-201ENSMUST00000182472 968 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Gm44329-201ENSMUST00000197469 112 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Gm5451-201ENSMUST00000080545 579 ntBASIC15.82■□□□□ 0.12
Chd4Q6PDQ2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 AC166341.2-201ENSMUST00000220571 120 ntBASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd4Q6PDQ2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd4Q6PDQ2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms