Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Gm7150-201ENSMUST00000122032 981 ntBASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Gm4034-201ENSMUST00000187674 480 ntBASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 AC154572.1-201ENSMUST00000226098 1204 ntBASIC18.67■□□□□ 0.58
Slx4Q6P1D7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Slx4Q6P1D7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Gm37981-201ENSMUST00000194280 535 ntBASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slx4Q6P1D7 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Gm10169-201ENSMUST00000121822 348 ntBASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Gm18514-201ENSMUST00000218980 436 ntBASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Arhgef33-207ENSMUST00000224966 490 ntBASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slx4Q6P1D7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Gm4811-201ENSMUST00000220879 1220 ntBASIC18.64■□□□□ 0.58
Slx4Q6P1D7 AC122346.3-201ENSMUST00000223983 306 ntBASIC18.64■□□□□ 0.58
Slx4Q6P1D7 CT573086.4-201ENSMUST00000226729 342 ntBASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slx4Q6P1D7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Gm11470-201ENSMUST00000118868 1475 ntBASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Gm37513-201ENSMUST00000194830 2268 ntBASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Gm38378-201ENSMUST00000195153 2268 ntBASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Zfp125-201ENSMUST00000079237 2488 ntBASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Gm8459-201ENSMUST00000162504 760 ntBASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Gm5706-201ENSMUST00000181525 993 ntBASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slx4Q6P1D7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slx4Q6P1D7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC18.63■□□□□ 0.57
Slx4Q6P1D7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms