Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Sdc3Q64519 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Sdc3Q64519 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sdc3Q64519 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.92□□□□□ -0.5
Sdc3Q64519 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.92□□□□□ -0.5
Sdc3Q64519 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Sdc3Q64519 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.91□□□□□ -0.5
Sdc3Q64519 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.91□□□□□ -0.5
Sdc3Q64519 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.91□□□□□ -0.5
Sdc3Q64519 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.91□□□□□ -0.5
Sdc3Q64519 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.91□□□□□ -0.5
Sdc3Q64519 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.91□□□□□ -0.5
Sdc3Q64519 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.91□□□□□ -0.5
Sdc3Q64519 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sdc3Q64519 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sdc3Q64519 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Sdc3Q64519 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.91□□□□□ -0.5
Sdc3Q64519 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sdc3Q64519 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sdc3Q64519 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sdc3Q64519 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sdc3Q64519 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.9□□□□□ -0.5
Sdc3Q64519 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.9□□□□□ -0.5
Sdc3Q64519 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sdc3Q64519 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm12058-201ENSMUST00000118614 437 ntBASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm14726-201ENSMUST00000120623 896 ntBASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm11597-201ENSMUST00000121423 964 ntBASIC11.9□□□□□ -0.5
Sdc3Q64519 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.9□□□□□ -0.5
Sdc3Q64519 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm8018-201ENSMUST00000173536 789 ntBASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.9□□□□□ -0.5
Sdc3Q64519 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.9□□□□□ -0.5
Sdc3Q64519 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sdc3Q64519 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.9□□□□□ -0.5
Sdc3Q64519 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sdc3Q64519 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms