Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
VcanQ62059 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Gm11952-201ENSMUST00000121172 821 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
VcanQ62059 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
VcanQ62059 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
VcanQ62059 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
VcanQ62059 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Gm14807-201ENSMUST00000116640 983 ntBASIC11.27□□□□□ -0.6
VcanQ62059 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Gm27826-201ENSMUST00000175282 255 ntBASIC11.27□□□□□ -0.6
VcanQ62059 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Gm29499-201ENSMUST00000189151 486 ntBASIC11.27□□□□□ -0.6
VcanQ62059 Gm28329-201ENSMUST00000191208 689 ntBASIC11.27□□□□□ -0.6
VcanQ62059 Gm29171-201ENSMUST00000191397 486 ntBASIC11.27□□□□□ -0.6
VcanQ62059 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.27□□□□□ -0.6
VcanQ62059 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
VcanQ62059 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.27□□□□□ -0.61
VcanQ62059 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.27□□□□□ -0.61
VcanQ62059 Gm11511-201ENSMUST00000118146 540 ntBASIC11.27□□□□□ -0.61
VcanQ62059 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.27□□□□□ -0.61
VcanQ62059 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.27□□□□□ -0.61
VcanQ62059 Gm43547-201ENSMUST00000197729 328 ntBASIC11.27□□□□□ -0.61
VcanQ62059 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.27□□□□□ -0.61
VcanQ62059 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
VcanQ62059 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC11.27□□□□□ -0.61
VcanQ62059 Mir432-201ENSMUST00000157230 75 ntBASIC11.27□□□□□ -0.61
VcanQ62059 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.27□□□□□ -0.61
VcanQ62059 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
VcanQ62059 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
VcanQ62059 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.27□□□□□ -0.61
VcanQ62059 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
VcanQ62059 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.27□□□□□ -0.61
VcanQ62059 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
VcanQ62059 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.27□□□□□ -0.61
VcanQ62059 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
VcanQ62059 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
VcanQ62059 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.26□□□□□ -0.61
VcanQ62059 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.26□□□□□ -0.61
VcanQ62059 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.26□□□□□ -0.61
VcanQ62059 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.26□□□□□ -0.61
VcanQ62059 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.26□□□□□ -0.61
VcanQ62059 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.26□□□□□ -0.61
VcanQ62059 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.26□□□□□ -0.61
VcanQ62059 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
VcanQ62059 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
VcanQ62059 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
VcanQ62059 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms