Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc6a4Q60857 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Slc6a4Q60857 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc6a4Q60857 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Gm7857-201ENSMUST00000117957 358 ntBASIC12.64□□□□□ -0.39
Slc6a4Q60857 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Gm28450-201ENSMUST00000187349 638 ntBASIC12.64□□□□□ -0.39
Slc6a4Q60857 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.64□□□□□ -0.39
Slc6a4Q60857 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a4Q60857 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a4Q60857 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.63□□□□□ -0.39
Slc6a4Q60857 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Gm23200-201ENSMUST00000104379 132 ntBASIC12.63□□□□□ -0.39
Slc6a4Q60857 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Mir5132-201ENSMUST00000175166 71 ntBASIC12.63□□□□□ -0.39
Slc6a4Q60857 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.63□□□□□ -0.39
Slc6a4Q60857 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a4Q60857 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms