Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Gm9630-201ENSMUST00000178304 885 ntBASIC11.82□□□□□ -0.52
Xrcc1Q60596 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.82□□□□□ -0.52
Xrcc1Q60596 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Xrcc1Q60596 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Gm9083-201ENSMUST00000120423 819 ntBASIC11.81□□□□□ -0.52
Xrcc1Q60596 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.81□□□□□ -0.52
Xrcc1Q60596 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Gm17376-201ENSMUST00000166016 84 ntBASIC11.81□□□□□ -0.52
Xrcc1Q60596 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Gm44958-201ENSMUST00000203734 736 ntBASIC11.81□□□□□ -0.52
Xrcc1Q60596 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.81□□□□□ -0.52
Xrcc1Q60596 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Xrcc1Q60596 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.8□□□□□ -0.52
Xrcc1Q60596 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm25668-201ENSMUST00000157700 129 ntBASIC11.8□□□□□ -0.52
Xrcc1Q60596 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Xrcc1Q60596 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms