Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 B9d1os-201ENSMUST00000137010 674 ntBASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gm5070-201ENSMUST00000177599 862 ntBASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gm45598-202ENSMUST00000210719 986 ntBASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shroom1Q5SX79 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Gm14644-201ENSMUST00000116671 647 ntBASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Gm11597-201ENSMUST00000121423 964 ntBASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Gm28450-201ENSMUST00000187349 638 ntBASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Gm45224-201ENSMUST00000208203 414 ntBASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Gm45433-201ENSMUST00000209386 247 ntBASIC13.15□□□□□ -0.3
Shroom1Q5SX79 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Rubie-203ENSMUST00000227803 2430 ntBASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shroom1Q5SX79 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Shroom1Q5SX79 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.14□□□□□ -0.31
Shroom1Q5SX79 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shroom1Q5SX79 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms