Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm23251-201ENSMUST00000103773 110 ntBASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm7851-201ENSMUST00000117574 323 ntBASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm17889-201ENSMUST00000198410 598 ntBASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc88aQ5SNZ0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.08□□□□□ -0.15
Ccdc88aQ5SNZ0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc88aQ5SNZ0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc88aQ5SNZ0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc88aQ5SNZ0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc88aQ5SNZ0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm11246-201ENSMUST00000120880 345 ntBASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm9463-201ENSMUST00000206707 601 ntBASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm2517-201ENSMUST00000215651 348 ntBASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Ginm1-202ENSMUST00000065124 300 ntBASIC14.08□□□□□ -0.16
Ccdc88aQ5SNZ0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm15573-201ENSMUST00000119487 540 ntBASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm6905-201ENSMUST00000205729 511 ntBASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc88aQ5SNZ0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88aQ5SNZ0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms